Fitting to a Cryo-EM Map using MD Simulation

Atomic structure models are refined into a cryo-EM density using

Structural interpretation of cryo-EM image reconstructions - ScienceDirect

Molecular Dynamics Flexible Fitting

Improvement of cryo-EM maps by simultaneous local and non-local deep learning

Local computational methods to improve the interpretability and analysis of cryo-EM maps

Molecular Dynamics Flexible Fitting

Automated cryo-EM structure refinement using correlation-driven molecular dynamics

Frontiers Multi-Scale Flexible Fitting of Proteins to Cryo-EM Density Maps at Medium Resolution

Advances in the molecular dynamics flexible fitting method for cryo-EM modeling.

Tutorial: Fit Biomolecules into Cryo-EM Maps using MD Simulation (GUI)

CR-I-TASSER pipeline Starting with a query sequence and cryo-EM density